Healthy Chicken Fajitas Meal Prep That Actually Tastes Amazing
If you’re looking for a meal prep recipe that’s healthy, bold, and never boring, this healthy chicken fajitas meal prep might just become your new go-to. Perfectly marinated chicken, sautéed peppers, and creamy cilantro lime black beans all come together in one colorful, protein-packed bowl. Whether you’re prepping lunches for the week or planning quick dinners, these bowls offer all the Tex-Mex flavor without the heavy calories. Even better, they hold up incredibly well in the fridge, making them ideal for busy schedules.
Let’s walk through how to bring this vibrant meal prep to life—and why it’s anything but your average chicken and rice bowl.
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Healthy Chicken Fajitas Meal Prep That Actually Tastes Amazing
- Total Time: 1 hour
- Yield: 6 servings
Description
Healthy chicken fajitas meal prep bowls made with juicy marinated chicken, sautéed peppers, and cilantro lime black beans. Perfect for clean eating and high-protein meal prep.
Ingredients
For the Chicken:
⅓ cup lime juice (from 2–3 limes)
¼ cup unsweetened pineapple juice
2 tablespoons low-sodium soy sauce
1 clove garlic, minced
1 teaspoon ground cumin
1 teaspoon paprika
½ teaspoon red pepper flakes
1 teaspoon sea salt
½ teaspoon ground black pepper
¼ cup chopped fresh cilantro
2 tablespoons olive oil
4 boneless, skinless chicken breasts (6–8 oz each)
For the Bell Peppers:
1 white onion, thinly sliced
1 poblano pepper, thinly sliced
2 red bell peppers, thinly sliced
1 green bell pepper, thinly sliced
1 teaspoon sea salt
½ teaspoon ground black pepper
¼ teaspoon garlic powder
For the Cilantro Lime Black Beans:
1 tablespoon olive oil
3 cloves garlic, minced
½ jalapeño, finely diced (about 1 tablespoon)
½ teaspoon cumin
2 cans (15 oz each) low-sodium black beans, rinsed and drained
1 cup low-sodium chicken broth
2 tablespoons lime juice
2 tablespoons chopped fresh cilantro
1 teaspoon sea salt
Instructions
1. Marinate the Chicken:
2. In a large bowl or zip-top bag, combine lime juice, pineapple juice, soy sauce, olive oil, garlic, cumin, paprika, red pepper flakes, salt, pepper, and cilantro. Add chicken breasts and coat well. Cover and refrigerate for at least 30 minutes, up to 8 hours.
3.
4. Cook the Chicken:
5. Heat 1 tablespoon olive oil in a skillet over medium-high heat. Remove chicken from marinade and cook 4–6 minutes per side until fully cooked. Let rest, then slice thinly.
6.
7. Sauté the Peppers:
8. In the same pan, add the onion and all peppers with salt, pepper, and garlic powder. Cook over medium-high heat until soft and slightly charred, about 4–6 minutes.
9.
10. Prepare the Beans:
11. Heat olive oil in a saucepan over medium-high heat. Add garlic, jalapeño, and cumin; cook for 1 minute until fragrant. Stir in beans and broth, then simmer 5 minutes. Lightly mash beans, then simmer another 8–10 minutes until thick. Stir in lime juice, cilantro, and salt.
12.
13. Assemble Meal Prep Bowls:
14. Divide black beans into containers. Add sliced chicken and sautéed peppers on top.
Notes
To keep veggies vibrant, don’t overcook them.
Add avocado or hot sauce before serving for extra flavor.
Chicken and peppers freeze well separately if you want to store long-term.
Swap beans with rice or cauliflower rice for custom macros.
- Prep Time: 20 minutes
- Cook Time: 40 minutes
- Category: Meal Prep Recipes
- Method: Stovetop
- Cuisine: Mexican
Why Healthy Chicken Fajitas Meal Prep Is the Weeknight Game-Changer
When it comes to meal prepping, convenience is key—but that doesn’t mean you have to sacrifice flavor or nutrition. These chicken fajita bowls strike that perfect balance between satisfying and smart. They’re rich in protein, full of veggies, and completely customizable to your lifestyle.
At the heart of this recipe is a crave-worthy fajita marinade that soaks into every bite of chicken. It’s fresh, zesty, and spiced just enough to wake up your tastebuds. Paired with colorful peppers and hearty black beans, it creates a filling meal that doesn’t feel heavy or greasy.
The beauty of this recipe is its versatility. These bowls are just as tasty hot or cold, and they’re easy to mix and match throughout the week. You can toss everything into a wrap, serve over rice, or eat straight from the container. It’s the kind of meal prep that actually gets eaten.
The Secret Behind the Bold, Juicy Chicken Flavor
What really sets this healthy chicken fajitas meal prep apart is the marinade. It starts with fresh lime juice and a splash of unsweetened pineapple juice, which both help tenderize the chicken while adding subtle citrus sweetness. Then comes a combination of low-sodium soy sauce, garlic, cumin, and paprika—all pantry staples that punch above their weight in flavor.
After at least 30 minutes (but ideally a few hours), the chicken gets pan-seared until golden on the outside and juicy on the inside. Resting the chicken before slicing helps lock in the juices, so every bite stays tender even days later.
A generous sprinkle of chopped cilantro not only boosts the flavor but adds a vibrant, herbaceous finish that brightens up the whole dish. It’s these little touches that make this meal feel fresh—even on day five.
Colorful, Crisp Veggies That Don’t Turn Mushy
Peppers and onions are the soul of any good fajita, and in this recipe, they’re treated with the respect they deserve. Red and green bell peppers bring sweetness and crunch, while the poblano adds a slight smoky kick. Thinly sliced white onion ties it all together with its natural sweetness.
To keep the veggies crisp-tender and brightly colored, they’re cooked over medium-high heat just until they soften and begin to char. Garlic powder, sea salt, and black pepper are all they need to shine. No soggy, limp peppers here—just that perfect fajita texture that holds up in the fridge.
If you want to level up the nutrition even more, consider adding in some mushrooms or zucchini during the last couple minutes of sautéing. The flavor of the chicken and spices is bold enough to handle a few more veggies.
Cilantro Lime Black Beans: The Meal Prep Upgrade You Didn’t Know You Needed
Most meal prep bowls skip the beans—but this recipe leans into them, and the result is a creamy, flavorful base that soaks up all the other toppings. These aren’t just any black beans, either. They’re simmered with garlic, cumin, and jalapeño for heat, then mashed slightly to thicken and absorb the lime juice and cilantro added at the end.
The texture is hearty without being too dense, and the broth they simmer in reduces to create a rich, savory coating. It’s the kind of side that could easily stand on its own—but in these fajita bowls, it adds depth and satiety in a way plain rice never could.
Plus, black beans are packed with fiber and plant-based protein, making these bowls even more filling and balanced. If you’re usually skeptical about beans in your meal prep, this version might just change your mind.
Putting It All Together: A Healthy Chicken Fajita Bowl Meal Prep You’ll Crave
Assembly is the fun part. Start by spooning the cilantro lime black beans into each container. Next, layer on the sliced chicken while it’s still warm so some of the flavor sinks into the beans. Finally, top everything with the vibrant sautéed peppers and onions.
You’ll end up with six perfectly portioned bowls that are high in protein, rich in fiber, and loaded with color. Each one delivers about 455 calories and 40g of protein—a macro-friendly combo for anyone trying to eat clean without skimping on flavor.
For storage, airtight glass containers work best to keep the layers fresh. When reheating, splash a little water or broth over the beans before microwaving to keep everything moist. These bowls can also be enjoyed cold or at room temperature if you’re in a rush.
And if you’re looking to expand your weekly rotation, check out these flavorful teriyaki chicken meal prep bowls or spice things up with meal prep chicken burrito bowls.
Customizations & Pairings for Healthy Chicken Fajitas Meal Prep
The beauty of these bowls is how easily they adapt to different diets. If you’re cutting carbs, skip the beans or swap in riced cauliflower. Need a gluten-free option? Simply replace the soy sauce with tamari or coconut aminos in the marinade.
Want to bulk them up? Add a scoop of brown rice, quinoa, or even farro. You could also turn these into fajita wraps using whole wheat tortillas, or top with avocado for a creamy finish. A squeeze of lime before serving makes the flavors pop even more.
And while chicken is the star here, this marinade works wonders with shrimp, tofu, or even thinly sliced steak. The prep steps stay exactly the same, which means one recipe can become several different meals depending on your mood.

FAQ — Healthy Chicken Fajitas Meal Prep
Can I freeze meal prep chicken fajitas?
Yes! You can freeze both the cooked chicken and sautéed peppers in airtight containers for up to 2 months. For best results, freeze the beans separately to maintain their creamy texture when reheated.
How long does healthy chicken fajita bowl meal prep last?
Stored properly in airtight containers, these bowls stay fresh in the refrigerator for up to 5 days. The flavors even deepen over time, making them perfect for enjoying throughout the week.
Can I make this recipe without beans?
Absolutely. If beans aren’t your thing, swap in seasoned rice, cauliflower rice, or even shredded lettuce for a lighter bowl. The chicken and veggies hold up perfectly on their own.
What’s the best container for storing fajita meal prep?
Glass meal prep containers with tight-fitting lids are ideal. They keep moisture in without letting the veggies get soggy and make reheating easy without warping.
Conclusion: Your New Favorite Healthy Chicken Fajitas Meal Prep Recipe
With bold flavors, colorful veggies, and a hearty base of beans, this healthy chicken fajitas meal prep recipe transforms the way you think about weekly lunches. It’s easy to make, stays delicious for days, and hits all the right nutrition notes without sacrificing taste. Whether you’re new to meal prepping or looking to spice up your usual routine, these bowls are a smart, satisfying place to start.
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